Geometric Deep Learning | Lovro Vrčekhttps://lvrcek.com/tags/geometric-deep-learning/Geometric Deep LearningHugo Blox Builder (https://hugoblox.com)en-usFri, 22 May 2026 00:00:00 +0000https://lvrcek.com/media/icon_hu11629036598829689587.pngGeometric Deep Learninghttps://lvrcek.com/tags/geometric-deep-learning/DipGNNome: Diploid de Novo Genome Assembly with Geometric Deep Learning and Beam-Searchhttps://lvrcek.com/publication/dipgnnome/Fri, 22 May 2026 00:00:00 +0000https://lvrcek.com/publication/dipgnnome/<!-- <div class="flex px-4 py-3 mb-6 rounded-md bg-primary-100 dark:bg-primary-900"> <span class="pr-3 pt-1 text-primary-600 dark:text-primary-300"> <svg height="24" xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path fill="none" stroke="currentColor" stroke-linecap="round" stroke-linejoin="round" stroke-width="1.5" d="m11.25 11.25l.041-.02a.75.75 0 0 1 1.063.852l-.708 2.836a.75.75 0 0 0 1.063.853l.041-.021M21 12a9 9 0 1 1-18 0a9 9 0 0 1 18 0m-9-3.75h.008v.008H12z"/></svg> </span> <span class="dark:text-neutral-300">Click the <em>Cite</em> button above to demo the feature to enable visitors to import publication metadata into their reference management software.</span> </div> <div class="flex px-4 py-3 mb-6 rounded-md bg-primary-100 dark:bg-primary-900"> <span class="pr-3 pt-1 text-primary-600 dark:text-primary-300"> <svg height="24" xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path fill="none" stroke="currentColor" stroke-linecap="round" stroke-linejoin="round" stroke-width="1.5" d="m11.25 11.25l.041-.02a.75.75 0 0 1 1.063.852l-.708 2.836a.75.75 0 0 0 1.063.853l.041-.021M21 12a9 9 0 1 1-18 0a9 9 0 0 1 18 0m-9-3.75h.008v.008H12z"/></svg> </span> <span class="dark:text-neutral-300">Create your slides in Markdown - click the <em>Slides</em> button to check out the example.</span> </div> Add the publication's **full text** or **supplementary notes** here. You can use rich formatting such as including [code, math, and images](https://docs.hugoblox.com/content/writing-markdown-latex/). -->GNNome-Decision: Enhancing GNN Training for de Novo Genome Assembly by Targeting Decision Nodeshttps://lvrcek.com/publication/decision/Fri, 22 May 2026 00:00:00 +0000https://lvrcek.com/publication/decision/<!-- <div class="flex px-4 py-3 mb-6 rounded-md bg-primary-100 dark:bg-primary-900"> <span class="pr-3 pt-1 text-primary-600 dark:text-primary-300"> <svg height="24" xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path fill="none" stroke="currentColor" stroke-linecap="round" stroke-linejoin="round" stroke-width="1.5" d="m11.25 11.25l.041-.02a.75.75 0 0 1 1.063.852l-.708 2.836a.75.75 0 0 0 1.063.853l.041-.021M21 12a9 9 0 1 1-18 0a9 9 0 0 1 18 0m-9-3.75h.008v.008H12z"/></svg> </span> <span class="dark:text-neutral-300">Click the <em>Cite</em> button above to demo the feature to enable visitors to import publication metadata into their reference management software.</span> </div> <div class="flex px-4 py-3 mb-6 rounded-md bg-primary-100 dark:bg-primary-900"> <span class="pr-3 pt-1 text-primary-600 dark:text-primary-300"> <svg height="24" xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path fill="none" stroke="currentColor" stroke-linecap="round" stroke-linejoin="round" stroke-width="1.5" d="m11.25 11.25l.041-.02a.75.75 0 0 1 1.063.852l-.708 2.836a.75.75 0 0 0 1.063.853l.041-.021M21 12a9 9 0 1 1-18 0a9 9 0 0 1 18 0m-9-3.75h.008v.008H12z"/></svg> </span> <span class="dark:text-neutral-300">Create your slides in Markdown - click the <em>Slides</em> button to check out the example.</span> </div> Add the publication's **full text** or **supplementary notes** here. You can use rich formatting such as including [code, math, and images](https://docs.hugoblox.com/content/writing-markdown-latex/). -->Geometric deep learning framework for de novo genome assemblyhttps://lvrcek.com/publication/gnnome/Tue, 15 Apr 2025 00:00:00 +0000https://lvrcek.com/publication/gnnome/